Remediating dynamic SQL into prepared statements

call_user_func_array(array($stmt, 'bind_param'), array($types)+$param);

/**
* @returns PDOStatement
*/
protected function prepareStatementForCase1(PDO $dbObject,Object $dataToBind){...}
/**
* @returns PDOStatement
*/
protected function prepareStatementForCase2(PDO $dbObject,Object $dataToBind){...}

class Document{
  protected $dbObject;

  public function __construct(PDO $dbObject){
    $this->dbObject=$dbObject;
  }
  public function doQuery($paramOne,$paramTwo,...){
    $logicalFormulaOne=...; // logical expression here with parameters
    $logicalFormulaTwo=...; // logical expression here with parameters
    if($logicalForumlaOne){
      $dbStatement=$this->prepareStatementForCase1($dataToBind);
    }else if($logicalFormuleTwo){
      $dbStatement=$this->prepareStatementForCase2($dataToBind);
    }
    $dbResult=$dbStatement->execute();
  }
  protected function prepareStatementForCase1(Object $dataToBind){
    $dbStatement=$this->dbObject->prepare("query string");
    $dbStatement->bindParam(...);
    return $dbStatement;
  }
}

SELECT * FROM table WHERE ID=?

function query($query, $param, $where)
{
$query = $mysql->prepare($query);
$query->bind_param($param, $where);
$query->execute();

...

} 

$results=query("SELECT * FROM table WHERE Id=?","s","1");

class query
{
  public $query;
  public $param;
  public $where;
}

$query=new query();
$query->query="SELECT * FROM Table WHERE group=? AND name like ?";
$query->param="ss";
$query->where = array();
$query->where[]="administrators";
$query->where[]="sam";

function SQLCall(query $query)
{
$db = $mysql->prepare($query->query);
call_user_func_array(array(&$db, 'bind_param'), $where)
$db->execute();

...

}